mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-13 13:23:09 +00:00
4b8c7ac7bd
* added template for module * update main * added specific code * wrong variable name in else script * added tests for both split and nosplit * docker test successful - updating yaml * adding echo to version print
23 lines
925 B
YAML
23 lines
925 B
YAML
- name: samtools bam2fq test_samtools_bam2fq_nosplit
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command: nextflow run tests/modules/samtools/bam2fq -entry test_samtools_bam2fq_nosplit -c tests/config/nextflow.config
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tags:
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- samtools/bam2fq
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- samtools
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files:
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- path: output/samtools/test_interleaved.fq.gz
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md5sum: d733e66d29a4b366bf9df8c42f845256
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- name: samtools bam2fq test_samtools_bam2fq_withsplit
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command: nextflow run tests/modules/samtools/bam2fq -entry test_samtools_bam2fq_withsplit -c tests/config/nextflow.config
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tags:
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- samtools/bam2fq
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- samtools
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files:
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- path: output/samtools/test_1.fq.gz
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md5sum: 4522edbe158ec4804765794569f67493
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- path: output/samtools/test_2.fq.gz
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md5sum: 7e00ef40d5cfe272b67461381019dcc1
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- path: output/samtools/test_other.fq.gz
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md5sum: 709872fc2910431b1e8b7074bfe38c67
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- path: output/samtools/test_singleton.fq.gz
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md5sum: 709872fc2910431b1e8b7074bfe38c67
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