Jose Espinosa-Carrasco 4e5b6ed843 Fix picard markduplicates (#1084) ... * Fix picard/markduplicates with new options syntax * Delete md5sum for bam files and add contains for metrics.txt Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com> Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de>		2021-11-18 21:54:14 +01:00
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collecthsmetrics	Picard/collecthsmetrics (#927)	2021-11-10 10:52:54 +01:00
collectmultiplemetrics	Rename software/ directory to modules/ to re-organise module structure (#567)	2021-07-07 10:10:18 +01:00
collectwgsmetrics	Rename software/ directory to modules/ to re-organise module structure (#567)	2021-07-07 10:10:18 +01:00
filtersamreads	Module new version reporting fixes (#753)	2021-09-28 10:51:19 +01:00
markduplicates	Fix picard markduplicates (#1084)	2021-11-18 21:54:14 +01:00
mergesamfiles	Module new version reporting fixes (#753)	2021-09-28 10:51:19 +01:00
sortsam	fix: picard sortsam (#605)	2021-07-21 14:34:21 +01:00