mirror of
https://github.com/MillironX/nf-core_modules.git
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967fb22ded
* Update versions * update checksums + remove variables as input for applyvqsr * sneak in removal of values and provide them via modules.config * update another checksum * more checksums * move vairable to config * remove controlfreec, wrong branch * add line break
27 lines
1.2 KiB
YAML
27 lines
1.2 KiB
YAML
- name: gatk4 markduplicates test_gatk4_markduplicates
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command: nextflow run tests/modules/gatk4/markduplicates -entry test_gatk4_markduplicates -c tests/config/nextflow.config -c ./tests/modules/gatk4/markduplicates/nextflow.config
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tags:
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- gatk4
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- gatk4/markduplicates
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files:
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- path: output/gatk4/test.bai
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md5sum: e9c125e82553209933883b4fe2b8d7c2
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- path: output/gatk4/test.bam
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md5sum: 2efd50b2e6b7fd9bdf242cd9e266cfa9
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- path: output/gatk4/test.metrics
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- path: output/gatk4/versions.yml
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md5sum: 0bc949aaa8792cd6c537cdaab0e2c145
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- name: gatk4 markduplicates test_gatk4_markduplicates_multiple_bams
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command: nextflow run tests/modules/gatk4/markduplicates -entry test_gatk4_markduplicates_multiple_bams -c tests/config/nextflow.config -c ./tests/modules/gatk4/markduplicates/nextflow.config
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tags:
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- gatk4
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- gatk4/markduplicates
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files:
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- path: output/gatk4/test.bai
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md5sum: bad71df9c876e72a5bc0a3e0fd755f92
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- path: output/gatk4/test.bam
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md5sum: 8187febc6108ffef7f907e89b9c091a4
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- path: output/gatk4/test.metrics
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- path: output/gatk4/versions.yml
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md5sum: b10d63cf7b2b672915cb30cea081ccd5
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