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5b1fe84bc6
* add new assembly scan module * add newline endings * fix newline ending * add newline at end Co-authored-by: Peri <rrx8@cdc.gov> Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com> Co-authored-by: Gregor Sturm <mail@gregor-sturm.de>
13 lines
368 B
Text
13 lines
368 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { ASSEMBLYSCAN } from '../../../modules/assemblyscan/main.nf' addParams( options: [:] )
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workflow test_assemblyscan {
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input = [ [ id:'test', single_end:false ], // meta map
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file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true) ]
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ASSEMBLYSCAN ( input )
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}
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