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* hmmcopy gccounter working * Update modules/hmmcopy/gccounter/main.nf Co-authored-by: Chris Cheshire <chris.j.cheshire@gmail.com> * Update main.nf Changed version to 0.1.1 as the container says Co-authored-by: Simon Pearce <simon.pearce@cruk.manchester.ac.uk> Co-authored-by: Chris Cheshire <chris.j.cheshire@gmail.com>
11 lines
321 B
Text
11 lines
321 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { HMMCOPY_GCCOUNTER } from '../../../../modules/hmmcopy/gccounter/main.nf' addParams( options: [:] )
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workflow test_hmmcopy_gccounter {
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fasta = file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true)
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HMMCOPY_GCCOUNTER (fasta)
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}
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