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1abe23e159
* feat: update samtools/index * feat: add test * fix: lint * fix: output file + md5
26 lines
925 B
YAML
26 lines
925 B
YAML
- name: samtools index bai
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command: nextflow run tests/modules/samtools/index -entry test_samtools_index_bai -c tests/config/nextflow.config
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tags:
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- samtools
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- samtools/index
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files:
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- path: output/samtools/test.paired_end.sorted.bam.bai
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md5sum: 704c10dd1326482448ca3073fdebc2f4
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- name: samtools index crai
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command: nextflow run tests/modules/samtools/index -entry test_samtools_index_crai -c tests/config/nextflow.config
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tags:
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- samtools
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- samtools/index
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files:
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- path: output/samtools/test.paired_end.recalibrated.sorted.cram.crai
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md5sum: 537e3d8c937bcc4e34e1cf47cd71d484
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- name: samtools index csi
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command: nextflow run tests/modules/samtools/index -entry test_samtools_index_csi -c tests/config/nextflow.config
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tags:
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- samtools
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- samtools/index
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files:
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- path: output/samtools/test.paired_end.sorted.bam.csi
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md5sum: 3dd9e3ed959fca075b88bb8dc3cf7dbd
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