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34 lines
1.7 KiB
YAML
34 lines
1.7 KiB
YAML
- name: gatk4 calculatecontamination test_gatk4_calculatecontamination_tumor_only
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command: nextflow run tests/modules/gatk4/calculatecontamination -entry test_gatk4_calculatecontamination_tumor_only -c tests/config/nextflow.config -c ./tests/modules/gatk4/calculatecontamination/nextflow.config
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tags:
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- gatk4
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- gatk4/calculatecontamination
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files:
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- path: output/gatk4/test.contamination.table
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md5sum: 46c708c943b453da89a3da08acfdb2a7
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- path: output/gatk4/versions.yml
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md5sum: 79575dc2e6a7f0361f2d8b090c496070
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- name: gatk4 calculatecontamination test_gatk4_calculatecontamination_matched_pair
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command: nextflow run tests/modules/gatk4/calculatecontamination -entry test_gatk4_calculatecontamination_matched_pair -c tests/config/nextflow.config -c ./tests/modules/gatk4/calculatecontamination/nextflow.config
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tags:
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- gatk4
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- gatk4/calculatecontamination
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files:
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- path: output/gatk4/test.contamination.table
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md5sum: 46c708c943b453da89a3da08acfdb2a7
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- path: output/gatk4/versions.yml
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md5sum: 733f15ef7eb504daec9fd8cd9beef71a
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- name: gatk4 calculatecontamination test_gatk4_calculatecontamination_segmentation
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command: nextflow run tests/modules/gatk4/calculatecontamination -entry test_gatk4_calculatecontamination_segmentation -c tests/config/nextflow.config -c ./tests/modules/gatk4/calculatecontamination/nextflow.config
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tags:
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- gatk4
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- gatk4/calculatecontamination
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files:
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- path: output/gatk4/test.contamination.table
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md5sum: 46c708c943b453da89a3da08acfdb2a7
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- path: output/gatk4/test.segmentation.table
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md5sum: f4643d9319bde4efbfbe516d6fb13052
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- path: output/gatk4/versions.yml
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md5sum: 5396e33146addbe4a59d0f30cb573a3a
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