nf-core_modules/tests/software/ivar/consensus/test.yml
Edmund Miller a3684d9594
Lint modules ci (#389)
* ci: Add modules lint step

Moved it ahead of the nextflow install so ideally it'll fail before we
bother doing any more setup

* ci: _ => /

* Update tests/config/pytest_software.yml

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-04-08 09:10:52 +01:00

12 lines
435 B
YAML

- name: ivar consensus
command: nextflow run ./tests/software/ivar/consensus -entry test_ivar_consensus -c tests/config/nextflow.config
tags:
- ivar
- ivar/consensus
files:
- path: output/ivar/test.fa
md5sum: 9e21a64818f4302b4dece5480fa5e8b8
- path: output/ivar/test.qual.txt
md5sum: 68b329da9893e34099c7d8ad5cb9c940
- path: output/ivar/test.mpileup
md5sum: d41d8cd98f00b204e9800998ecf8427e