mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-10 20:23:10 +00:00
9e0abcc443
* add module for ssuisero * Update main.nf * Update meta.yml Co-authored-by: Sateesh <33637490+sateeshperi@users.noreply.github.com>
43 lines
1.1 KiB
YAML
43 lines
1.1 KiB
YAML
name: ssuissero
|
|
description: Serotype prediction of Streptococcus suis assemblies
|
|
keywords:
|
|
- bacteria
|
|
- fasta
|
|
- streptococcus
|
|
tools:
|
|
- ssuissero:
|
|
description: Rapid Streptococcus suis serotyping pipeline for Nanopore Data
|
|
homepage: https://github.com/jimmyliu1326/SsuisSero
|
|
documentation: https://github.com/jimmyliu1326/SsuisSero
|
|
tool_dev_url: https://github.com/jimmyliu1326/SsuisSero
|
|
doi: ""
|
|
licence: ['MIT']
|
|
|
|
input:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- fasta:
|
|
type: file
|
|
description: Assembly in FASTA format
|
|
pattern: "*.{fasta,fasta.gz,fa,fa.gz,fna,fna.gz,faa,faa.gz}"
|
|
|
|
output:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- versions:
|
|
type: file
|
|
description: File containing software versions
|
|
pattern: "versions.yml"
|
|
- tsv:
|
|
type: file
|
|
description: Tab-delimited serotype prediction
|
|
pattern: "*.{tsv}"
|
|
|
|
authors:
|
|
- "@rpetit3"
|