mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-22 11:08:17 +00:00
906577873b
* New functions.nf * Convert code to create versions.yml * Update meta.yml * update output channel * Fix more meta.yml * Manually update remaining modules * remove superflous echo * Fix misformatted meta.yml files * Fix yaml, was list instead of dict * fix version for bcftools Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
41 lines
1.1 KiB
YAML
41 lines
1.1 KiB
YAML
name: snpdists
|
|
description: Pairwise SNP distance matrix from a FASTA sequence alignment
|
|
keywords:
|
|
- snp-dists
|
|
- distance-matrix
|
|
tools:
|
|
- snpdists:
|
|
description: Convert a FASTA alignment to SNP distance matrix
|
|
homepage: https://github.com/tseemann/snp-dists
|
|
documentation: https://github.com/tseemann/snp-dists
|
|
tool_dev_url: https://github.com/tseemann/snp-dists
|
|
doi: ""
|
|
licence: ['GPL v3']
|
|
|
|
input:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- alignment:
|
|
type: file
|
|
description: The input FASTA sequence alignment file
|
|
pattern: "*.{fasta,fasta.gz}"
|
|
|
|
output:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- tsv:
|
|
type: file
|
|
description: The output TSV file containing SNP distance matrix
|
|
pattern: "*.tsv"
|
|
- version:
|
|
type: file
|
|
description: File containing software version
|
|
pattern: "versions.yml"
|
|
authors:
|
|
- "@abhi18av"
|