| .. |
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adapterremoval
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Update restructured paths (#380)
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2021-03-24 18:26:54 +00:00 |
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allelecounter
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Update test data paths. (#375)
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2021-03-24 18:18:01 +00:00 |
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bandage/image
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Re-organise all test data (#354)
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2021-03-24 09:53:41 +00:00 |
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bcftools
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update test data paths (#373)
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2021-03-24 18:14:11 +00:00 |
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bedtools
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Update bedtools modules with config logic (#369)
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2021-03-24 14:14:19 +00:00 |
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bismark
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Fixing vcftools and bismark tests (#383)
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2021-03-25 09:12:08 +00:00 |
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blast
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update tests for new config (#384)
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2021-04-01 20:22:06 +01:00 |
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bowtie
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Re-organise all test data (#354)
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2021-03-24 09:53:41 +00:00 |
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bowtie2
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Fix some module test after adapting test config approach (#379)
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2021-03-24 18:29:41 +00:00 |
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bwa
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Update test paths in bwa mappers (#387)
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2021-03-25 09:24:21 +00:00 |
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bwamem2
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Update test paths in bwa mappers (#387)
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2021-03-25 09:24:21 +00:00 |
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bwameth
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Fix some module test after adapting test config approach (#379)
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2021-03-24 18:29:41 +00:00 |
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cat/fastq
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Fix some module tests after switching to config data (#386)
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2021-03-24 18:28:07 +00:00 |
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cnvkit
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Update test data paths. (#375)
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2021-03-24 18:18:01 +00:00 |
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cutadapt
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Update test data paths. (#375)
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2021-03-24 18:18:01 +00:00 |
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dsh
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Update restructured paths (#380)
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2021-03-24 18:26:54 +00:00 |
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fastp
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modify fastp tests (#367)
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2021-03-24 17:08:59 +01:00 |
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fastqc
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Use a config containing all test data for module tests (#365)
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2021-03-24 13:07:37 +00:00 |
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fgbio
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New modules: Fgbio callmolecularconsensusreads and sortbam (#352)
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2021-03-28 20:38:50 +01:00 |
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flash
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update tests for new config (#384)
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2021-04-01 20:22:06 +01:00 |
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gatk4
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gatk4 markduplicates (#356)
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2021-03-26 23:25:40 +00:00 |
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gffread
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Fixing a bunch of module tests (#370)
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2021-03-24 17:36:29 +00:00 |
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gunzip
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Update test data paths. (#375)
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2021-03-24 18:18:01 +00:00 |
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hisat2
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Add tests for hisat2 (#366)
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2021-03-25 21:08:46 +00:00 |
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homer/annotatepeaks
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Fixing a bunch of module tests (#370)
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2021-03-24 17:36:29 +00:00 |
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ivar
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Update test data paths. (#375)
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2021-03-24 18:18:01 +00:00 |
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kallisto/index
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Add module kallisto/index (#357)
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2021-03-24 12:25:39 +00:00 |
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kraken2/run
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Fix some module tests after switching to config data (#386)
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2021-03-24 18:28:07 +00:00 |
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methyldackel
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MethylDackel: fix version scraping (#401)
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2021-04-06 10:59:33 +01:00 |
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minia
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Fixing a bunch of module tests (#370)
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2021-03-24 17:36:29 +00:00 |
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minimap2/align
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Re-organise all test data (#354)
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2021-03-24 09:53:41 +00:00 |
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mosdepth
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update tests for new config (#384)
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2021-04-01 20:22:06 +01:00 |
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msisensor
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Add module: nf-core hackathon #207 : new module: msisensor/msi (#343)
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2021-03-25 16:46:00 -04:00 |
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multiqc
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Fix some module test after adapting test config approach (#379)
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2021-03-24 18:29:41 +00:00 |
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optitype
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update tests for new config (#384)
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2021-04-01 20:22:06 +01:00 |
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pangolin
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Version bumps and minor module updates (#406)
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2021-04-06 13:38:41 +01:00 |
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picard
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Fix a bunch of failing tests after switching to test config (#378)
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2021-03-24 18:28:54 +00:00 |
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preseq/lcextrap
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Re-organise all test data (#354)
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2021-03-24 09:53:41 +00:00 |
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prodigal
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Update test data paths. (#375)
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2021-03-24 18:18:01 +00:00 |
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prokka
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Update test data paths. (#375)
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2021-03-24 18:18:01 +00:00 |
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qualimap/bamqc
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update tests for new config (#384)
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2021-04-01 20:22:06 +01:00 |
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quast
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update tests for new config (#384)
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2021-04-01 20:22:06 +01:00 |
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salmon
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Fix the test path salmon/index and quant after switching to config data (#385)
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2021-03-25 17:03:25 +00:00 |
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samtools
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Update samtools modules with config logic (#381)
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2021-03-24 18:15:30 +00:00 |
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seacr/callpeak
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Re-organise all test data (#354)
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2021-03-24 09:53:41 +00:00 |
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seqkit/split2
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Seqkit/split2 test path update (#372)
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2021-03-24 17:05:43 +01:00 |
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sequenzautils
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PR for sequenzautils/bam2seqz (#395)
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2021-04-01 07:08:27 +02:00 |
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seqwish/induce
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Fixing a bunch of module tests (#370)
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2021-03-24 17:36:29 +00:00 |
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shovill
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Re-organise all test data (#354)
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2021-03-24 09:53:41 +00:00 |
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spades
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Version bumps and minor module updates (#406)
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2021-04-06 13:38:41 +01:00 |
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star
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Re-organise all test data (#354)
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2021-03-24 09:53:41 +00:00 |
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strelka/germline
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Re-organise all test data (#354)
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2021-03-24 09:53:41 +00:00 |
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stringtie
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Re-organise all test data (#354)
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2021-03-24 09:53:41 +00:00 |
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subread/featurecounts
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Add tests for subread #106 (#393)
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2021-04-01 20:02:36 +01:00 |
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tabix
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update tests for new config (#384)
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2021-04-01 20:22:06 +01:00 |
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tiddit/sv
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update tests for new config (#384)
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2021-04-01 20:22:06 +01:00 |
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trimgalore
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Fix a bunch of failing tests after switching to test config (#378)
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2021-03-24 18:28:54 +00:00 |
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ucsc
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Re-organise all test data (#354)
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2021-03-24 09:53:41 +00:00 |
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unicycler
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update tests for new config (#384)
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2021-04-01 20:22:06 +01:00 |
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untar
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Fix some module tests after switching to config data (#386)
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2021-03-24 18:28:07 +00:00 |
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vcftools
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Fixing vcftools and bismark tests (#383)
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2021-03-25 09:12:08 +00:00 |
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yara
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Add YARA module (#353)
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2021-03-24 17:14:52 +01:00 |
242fdb2f73