nf-core_modules/tests/modules/bcl2fastq/nextflow.config
Matthias De Smet 9294259eea
Module/bcl2fastq (#1883)
* add bcl2fastq

* test fixes

* fixed tests

* add tests to workflow

* change container source
2022-07-14 13:18:21 +02:00

12 lines
299 B
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process {
publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
withName: BCL2FASTQ {
ext.args = {[
"--tiles s_1_1101"
].join(" ").trim()}
}
withName: UNTAR {
publishDir = [ enabled: false ]
}
}