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28 lines
718 B
Text
28 lines
718 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { KAT_HIST } from '../../../../modules/kat/hist/main.nf'
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workflow test_kat_hist_single_end {
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input = [
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[ id:'test', single_end:true ], // meta map
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file(params.test_data['homo_sapiens']['illumina']['test2_1_fastq_gz'], checkIfExists: true)
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]
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KAT_HIST ( input )
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}
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workflow test_kat_hist_paired_end {
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input = [
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[ id:'test', single_end:false ], // meta map
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[
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file(params.test_data['homo_sapiens']['illumina']['test2_1_fastq_gz'], checkIfExists: true),
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file(params.test_data['homo_sapiens']['illumina']['test2_2_fastq_gz'], checkIfExists: true),
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]
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]
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KAT_HIST ( input )
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}
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