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653e9e05b1
* add module for dragonflye * fix tests for dragonflye * Update test.yml * Update meta.yml * Update main.nf * Update main.nf * Update modules/dragonflye/meta.yml Co-authored-by: Gregor Sturm <mail@gregor-sturm.de>
22 lines
861 B
Text
22 lines
861 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { DRAGONFLYE } from '../../../modules/dragonflye/main.nf' addParams( options: [args: '--assembler miniasm --gsize 5000000'] )
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include { DRAGONFLYE as DRAGONFLYE_RAVEN } from '../../../modules/dragonflye/main.nf' addParams( options: [args: '--assembler raven --gsize 5000000'] )
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workflow test_dragonflye {
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input = [ [ id:'test', single_end:true ], // meta map
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[ file("https://github.com/nf-core/test-datasets/raw/bacass/nanopore/subset15000.fq.gz", checkIfExists: true) ]
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]
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DRAGONFLYE ( input )
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}
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workflow test_dragonflye_raven {
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input = [ [ id:'test', single_end:true ], // meta map
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[ file("https://github.com/nf-core/test-datasets/raw/bacass/nanopore/subset15000.fq.gz", checkIfExists: true) ]
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]
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DRAGONFLYE_RAVEN ( input )
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}
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