nf-core_modules/tests/software
Jose Espinosa-Carrasco 8f4363ccb5
Merge pull request #247 from JoseEspinosa/bcftools-mpileup
Add bcftools mpileup module
2021-02-24 09:24:43 +01:00
..
bandage/image Address review comments 2021-02-04 12:10:54 -06:00
bcftools Adding arguments to make md5 hashes stable 2021-02-23 19:39:24 +01:00
bedtools Update tests/software/bedtools/maskfasta/main.nf 2021-02-09 21:36:38 +00:00
bismark add bismark/deduplicate + tests 2021-02-23 18:02:16 +01:00
blast Adding blast blastn module 2021-02-09 16:58:36 +01:00
bowtie Update tests/software/bowtie/align/test.yml 2021-02-04 10:19:28 +00:00
bowtie2 Update tests/software/bowtie2/build/test.yml 2021-02-04 10:07:44 +00:00
bwa fix: update checksum or filename 2021-02-17 01:34:50 +01:00
bwamem2 fix: update checksum or filename 2021-02-17 01:34:50 +01:00
bwameth bwameth/index: update test.yml 2021-02-20 12:55:09 +01:00
cat/fastq Fixing test tags 2021-02-12 18:49:57 +01:00
cutadapt Restructure tests to run individually for each module 2021-02-03 16:02:58 +00:00
dsh Change path to tests 2021-02-03 16:44:56 +00:00
fastp fix: update checksum or filename 2021-02-17 01:34:50 +01:00
fastqc Fix fastqc test 2021-02-03 17:03:30 +00:00
gatk/createsequencedictionary fix: correct md5sum 2021-02-16 13:54:54 +01:00
gatk4 added gatk4 revertsam 2021-02-22 15:21:39 +01:00
gffread Restructure tests to run individually for each module 2021-02-03 16:02:58 +00:00
gunzip Fix file output path on test 2021-02-09 10:22:50 +01:00
ivar Fix tests for iVar variants 2021-02-16 23:29:15 +00:00
methyldackel add methyldackel/mbias + tests 2021-02-17 19:27:57 +01:00
minimap2/align Remove single_end if/else 2021-02-05 11:35:11 -06:00
mosdepth Adding mosdepth module 2021-02-15 14:33:44 +01:00
multiqc Fix multiqc tests 2021-02-03 17:43:14 +00:00
pangolin fix: update checksum or filename 2021-02-17 01:34:50 +01:00
picard Fix picard mergesamfiles test 2021-02-03 17:31:41 +00:00
preseq/lcextrap Fix preseq tests 2021-02-03 17:28:44 +00:00
qualimap/bamqc add qualimap/bamqc + test 2021-02-17 17:34:51 +01:00
quast Restructure tests to run individually for each module 2021-02-03 16:02:58 +00:00
salmon Fix salmon quant tests 2021-02-03 17:36:06 +00:00
samtools Update tests/software/samtools/faidx/main.nf 2021-02-17 17:24:50 +01:00
seacr/callpeak Change path to tests 2021-02-03 16:44:56 +00:00
seqwish/induce Add module for seqwish/induce 2021-02-17 11:19:47 -06:00
star fix: update checksum or filename 2021-02-17 01:34:50 +01:00
stringtie fix: update checksum or filename 2021-02-17 01:34:50 +01:00
tabix Merge pull request #180 from MaxUlysse/master_tabix_bgzip 2021-02-16 23:32:23 +00:00
TOOL/SUBTOOL fix: update checksum or filename 2021-02-17 01:34:50 +01:00
trimgalore Fix trimgalore test 2021-02-03 17:02:52 +00:00
ucsc/bedgraphtobigwig Change path to tests 2021-02-03 16:44:56 +00:00
untar Add untar module 2021-02-09 11:50:32 +01:00