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https://github.com/MillironX/nf-core_modules.git
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90aef30f43
* Set process label to `process_single` for modules with no `task.cpus` usage * Fix tests of 'borked' modules * prettier * More modules are single-threaded and can use process_single * Adding process_single to hmmer/esl* modules * Fix failing tests * Prettier Co-authored-by: Matthieu Muffato <mm49@sanger.ac.uk> Co-authored-by: Daniel Lundin <erik.rikard.daniel@gmail.com>
22 lines
804 B
YAML
22 lines
804 B
YAML
- name: seqtk sample test_seqtk_sample_single_end
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command: nextflow run ./tests/modules/seqtk/sample -entry test_seqtk_sample_single_end -c ./tests/config/nextflow.config -c ./tests/modules/seqtk/sample/nextflow.config
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tags:
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- seqtk
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- seqtk/sample
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files:
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- path: output/seqtk/test.sampled.fastq.gz
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contains:
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- "@ERR5069949"
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- name: seqtk sample test_seqtk_sample_paired_end
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command: nextflow run ./tests/modules/seqtk/sample -entry test_seqtk_sample_paired_end -c ./tests/config/nextflow.config -c ./tests/modules/seqtk/sample/nextflow.config
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tags:
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- seqtk
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- seqtk/sample
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files:
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- path: output/seqtk/test.sampled_1.fastq.gz
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contains:
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- "@ERR5069949"
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- path: output/seqtk/test.sampled_2.fastq.gz
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contains:
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- "@ERR5069949"
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