nf-core_modules/modules/mafft/meta.yml
Thomas A. Christensen II 841c661cad
Add MAFFT module (#1351)
Signed-off-by: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>

Co-authored-by: Sateesh <33637490+sateeshperi@users.noreply.github.com>
Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com>
2022-02-28 00:40:24 -07:00

42 lines
1.2 KiB
YAML

name: mafft
description: Multiple sequence alignment using MAFFT
keywords:
- msa
- multiple sequence alignment
tools:
- mafft:
description: Multiple alignment program for amino acid or nucleotide sequences based on fast Fourier transform
homepage: https://mafft.cbrc.jp/alignment/software/
documentation: https://mafft.cbrc.jp/alignment/software/manual/manual.html
tool_dev_url: https://mafft.cbrc.jp/alignment/software/source.html
doi: "10.1093/nar/gkf436"
licence: ['BSD']
input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- fasta:
type: file
description: FASTA file containing the sequences to align
pattern: "*.{fa,fasta}"
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
- fas:
type: file
description: Aligned sequences in FASTA format
pattern: "*.{fas}"
authors:
- "@MillironX"