mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-09-21 07:42:05 +00:00
e937c7950a
* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
21 lines
731 B
YAML
21 lines
731 B
YAML
- name: unicycler single-end
|
|
command: nextflow run ./tests/modules/unicycler -entry test_unicycler_single_end -c tests/config/nextflow.config
|
|
tags:
|
|
- unicycler
|
|
files:
|
|
- path: output/unicycler/test.scaffolds.fa
|
|
- path: output/unicycler/test.assembly.gfa
|
|
- path: output/unicycler/test.unicycler.log
|
|
contains:
|
|
- "Assembly complete"
|
|
|
|
- name: unicycler paired-end
|
|
command: nextflow run ./tests/modules/unicycler -entry test_unicycler_paired_end -c tests/config/nextflow.config
|
|
tags:
|
|
- unicycler
|
|
files:
|
|
- path: output/unicycler/test.scaffolds.fa
|
|
- path: output/unicycler/test.assembly.gfa
|
|
- path: output/unicycler/test.unicycler.log
|
|
contains:
|
|
- "Assembly complete"
|