mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-13 05:13:09 +00:00
26 lines
546 B
YAML
26 lines
546 B
YAML
name: "nf-core/modules CI"
|
|
on: [push, pull_request]
|
|
|
|
jobs:
|
|
run_multiqc:
|
|
name: Test modules
|
|
runs-on: ubuntu-latest
|
|
|
|
steps:
|
|
|
|
# Check out the repository
|
|
- uses: actions/checkout@v1
|
|
|
|
# Test each module
|
|
|
|
- name: FastQC
|
|
paths: tools/fastqc/*
|
|
run: nextflow run ./tools/fastqc/test/
|
|
|
|
- name: samtools sort
|
|
paths: tools/samtoosl/sort*
|
|
run: nextflow run ./tools/samtools/sort/test/
|
|
|
|
- name: samtools index
|
|
paths: tools/samtoosl/index*
|
|
run: nextflow run ./tools/samtools/index/test/
|