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f1c5384c31
* fix: remove left-over unnecessary code * Add prinseq++ * Remove last todo * Fix tests due to variability of output FASTQs (reads can be ordered differently between runs) * Apply suggestions from code review
9 lines
195 B
Text
9 lines
195 B
Text
process {
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publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
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withName: PRINSEQPLUSPLUS {
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ext.args = "-lc_entropy=0.8"
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}
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}
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