mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-13 05:13:09 +00:00
894349b9b5
* Update test data names. Closes: #459 Thanks: @FriederikeHanssen (`samtools` tests are already fixed by another commit) * Fix file names in tests. The update of test data name required changes in the test yml files. I also updated the `bismark/summary/main.nf` file to get its data from the `params.test_data` map.
10 lines
472 B
YAML
10 lines
472 B
YAML
- name: Run bismark deduplicate test workflow
|
|
command: nextflow run ./tests/software/bismark/deduplicate -entry test_bismark_deduplicate -c tests/config/nextflow.config
|
|
tags:
|
|
- bismark
|
|
- bismark/deduplicate
|
|
files:
|
|
- path: output/bismark/test.paired_end.methylated.deduplicated.bam
|
|
md5sum: 82213a207048bcb5d8cc1cee92703a29
|
|
- path: output/bismark/test.paired_end.methylated.deduplication_report.txt
|
|
md5sum: 86aaf87bac9ccdc3cc83628f20b902dc
|