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* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
39 lines
1,001 B
YAML
39 lines
1,001 B
YAML
name: qcat
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description: Demultiplexer for Nanopore samples
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keywords:
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- demultiplex
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tools:
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- qcat:
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description: |
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A demultiplexer for Nanopore samples
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homepage: https://github.com/nanoporetech/qcat
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documentation: https://github.com/nanoporetech/qcat#qcat
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- reads:
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type: file
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description: |
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Non-demultiplexed fastq files
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- reads:
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type: file
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description: Demultiplexed fastq samples
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pattern: "*.fastq.gz"
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- version:
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type: file
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description: File containing software version
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pattern: "*.{version.txt}"
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authors:
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- "@yuukiiwa"
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- "@drpatelh"
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