nf-core_modules/tests/modules/bbmap
tamuanand 57b43ed3de
New module - BBMap clumpify (#1978)
* Update meta.yml by fixing html pattern expected 

Fixed html pattern typo:

Before: pattern: "*.thml"

After fix: pattern: "*.html"

* main.nf for bbmap_clumpify

* meta.yml for bbmap_clumpify

* bbmap/clumpify via Gitpod and @mahesh-panchal guide

* small changes to tests

* explicit mention of output file pattern - *.clumped.fastq.gz

* Update modules/bbmap/clumpify/main.nf

Co-authored-by: Mahesh Binzer-Panchal <mahesh.binzer-panchal@nbis.se>

* Update modules/bbmap/clumpify/main.nf

Accepted @mahesh-panchal suggestions

Co-authored-by: Mahesh Binzer-Panchal <mahesh.binzer-panchal@nbis.se>

Co-authored-by: Mahesh Binzer-Panchal <mahesh.binzer-panchal@nbis.se>
Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>
2022-09-05 08:23:08 +02:00
..
align Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
bbduk Change syntax from task.ext.suffix to tast.ext.prefix in all modules (#1110) 2021-12-02 12:39:55 +00:00
bbsplit Fix formatting in yaml files, add yamllint config (#1279) 2022-02-15 11:15:27 +00:00
clumpify New module - BBMap clumpify (#1978) 2022-09-05 08:23:08 +02:00
index Update all modules to new NF DSL2 syntax (#1099) 2021-11-26 07:58:40 +00:00
pileup Samtools version update (#1507) 2022-04-11 14:26:28 +02:00