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https://github.com/MillironX/nf-core_modules.git
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e937c7950a
* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
31 lines
1.3 KiB
YAML
31 lines
1.3 KiB
YAML
- name: adapterremoval test_adapterremoval_single_end
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command: nextflow run tests/modules/adapterremoval -entry test_adapterremoval_single_end -c tests/config/nextflow.config
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tags:
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- adapterremoval
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files:
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- path: output/adapterremoval/test.log
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md5sum: 2fd3d5d703b63ba33a83021fccf25f77
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- path: output/adapterremoval/test.trimmed.fastq.gz
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md5sum: 62139afee94defad5b83bdd0b8475a1f
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- name: adapterremoval test_adapterremoval_paired_end
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command: nextflow run tests/modules/adapterremoval -entry test_adapterremoval_paired_end -c tests/config/nextflow.config
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tags:
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- adapterremoval
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files:
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- path: output/adapterremoval/test.pair2.trimmed.fastq.gz
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md5sum: f076a9f666235e01a3281f8c46c9d010
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- path: output/adapterremoval/test.log
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md5sum: bea86105aff4d27fe29c83e24498fefa
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- path: output/adapterremoval/test.pair1.trimmed.fastq.gz
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md5sum: f076a9f666235e01a3281f8c46c9d010
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- name: adapterremoval test_adapterremoval_paired_end_collapse
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command: nextflow run tests/modules/adapterremoval -entry test_adapterremoval_paired_end_collapse -c tests/config/nextflow.config
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tags:
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- adapterremoval
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files:
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- path: output/adapterremoval/test.log
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md5sum: 97cb97b3d03123ac88430768b2e36c59
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- path: output/adapterremoval/test.merged.fastq.gz
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md5sum: 50a4f9fdac6a24e211eb4dcf9f292bef
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