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https://github.com/MillironX/nf-core_modules.git
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e745e167c1
* fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
16 lines
750 B
YAML
16 lines
750 B
YAML
- name: isoseq3 refine test_isoseq3_refine
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command: nextflow run ./tests/modules/isoseq3/refine -entry test_isoseq3_refine -c ./tests/config/nextflow.config -c ./tests/modules/isoseq3/refine/nextflow.config
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tags:
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- isoseq3
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- isoseq3/refine
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files:
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- path: output/isoseq3/test.refine.bam
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md5sum: e8387afd5f66a7f6a89f90a0dcf3b823
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- path: output/isoseq3/test.refine.bam.pbi
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md5sum: 8097cad9e472f2f79de6de5fe3dcc822
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- path: output/isoseq3/test.refine.consensusreadset.xml
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contains: ["pbds:ConsensusReadSet"]
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- path: output/isoseq3/test.refine.filter_summary.json
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md5sum: 87f8bdd5c60741f47b8a991e002f7ef3
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- path: output/isoseq3/test.refine.report.csv
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md5sum: d42a139e5d9b08396bdb087c01243ea9
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