nf-core_modules/tests/modules/samtools
Matthias De Smet bbb99cb8d6
Fix/samtools flagstat (#1979)
* fix samtools stats thread usage

* flagstat: fix threads
2022-08-29 13:11:58 +02:00
..
ampliconclip Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
bam2fq Remove variable md5sum from the tests 2022-05-05 08:32:45 +02:00
collatefastq Add samtools/collatefastq module (#1536) 2022-04-20 10:05:17 +02:00
convert Generalize Bam2Cram do either conversion 2022-05-09 15:22:54 +02:00
depth Update all modules to new NF DSL2 syntax (#1099) 2021-11-26 07:58:40 +00:00
dict Added the samtools/dict module (#1922) 2022-07-26 22:13:19 +01:00
faidx Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
fastq update samtools version to 1.15 (#1358) 2022-02-28 12:42:29 +01:00
fixmate Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
flagstat Fix/samtools flagstat (#1979) 2022-08-29 13:11:58 +02:00
idxstats samtools/*stats*: use prefix for outputs (#1788) 2022-06-16 13:42:01 +02:00
index update samtools version to 1.15 (#1358) 2022-02-28 12:42:29 +01:00
merge small update to samtools/merge (#1896) 2022-07-18 11:37:45 +02:00
mpileup Mpileup intervals (#1955) 2022-08-16 14:16:35 +02:00
sort Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
stats fix samtools stats thread usage (#1975) 2022-08-29 12:05:47 +02:00
view fix datatest for stubs 2022-05-06 15:34:18 +02:00