mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-23 03:28:17 +00:00
7f7f6bc913
* Add hamronization/abricate * Update input pattern in meta.yml * Update location of hamronization test data * Apply suggestions from code review
15 lines
441 B
Text
15 lines
441 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { HAMRONIZATION_DEEPARG } from '../../../../modules/hamronization/deeparg/main.nf'
|
|
|
|
workflow test_hamronization_deeparg {
|
|
|
|
input = [
|
|
[ id:'test', single_end:false ], // meta map
|
|
file(params.test_data['bacteroides_fragilis']['hamronization']['genome_mapping_potential_arg'], checkIfExists: true),
|
|
]
|
|
|
|
HAMRONIZATION_DEEPARG ( input, 'tsv', '1.0.2', '2' )
|
|
}
|