mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-09-21 15:52:05 +00:00
48 lines
1.7 KiB
YAML
48 lines
1.7 KiB
YAML
- name: Run bcftools filter test workflow
|
|
command: nextflow run ./tests/software/bcftools/ -profile docker -entry test_bcftools_filter -c tests/config/nextflow.config
|
|
tags:
|
|
- bcftools
|
|
- bcftools_filter
|
|
files:
|
|
- path: output/bcftools/test.vcf.gz
|
|
md5sum: 16947ce72a127938d881113a1e6e696b
|
|
|
|
- name: Run bcftools stats test workflow
|
|
command: nextflow run ./tests/software/bcftools/ -profile docker -entry test_bcftools_stats -c tests/config/nextflow.config
|
|
tags:
|
|
- bcftools
|
|
- bcftools_stats
|
|
files:
|
|
- path: output/bcftools/test.bcftools_stats.txt
|
|
md5sum: abfc6a90f84e24b2cc7e92cbce06200a
|
|
|
|
- name: Run bcftools bgzip test workflow
|
|
command: nextflow run ./tests/software/bcftools/ -profile docker -entry test_bcftools_bgzip -c tests/config/nextflow.config
|
|
tags:
|
|
- bcftools
|
|
- bcftools_bgzip
|
|
files:
|
|
- path: output/bcftools/test.vcf.gz
|
|
md5sum: eb75ae1f08a1884f8edc59ed423471a2
|
|
|
|
- name: Run bcftools tabix test workflow
|
|
command: nextflow run ./tests/software/bcftools/ -profile docker -entry test_bcftools_tabix -c tests/config/nextflow.config
|
|
tags:
|
|
- bcftools
|
|
- bcftools_tabix
|
|
files:
|
|
- path: output/bcftools/test.vcf.gz.tbi
|
|
md5sum: 06d52177f819730dd409157914534e8d
|
|
|
|
- name: Run bcftools consensus test workflow
|
|
command: nextflow run ./tests/software/bcftools/ -profile docker -entry test_bcftools_consensus -c tests/config/nextflow.config
|
|
tags:
|
|
- bcftools
|
|
- bcftools_consensus
|
|
files:
|
|
- path: output/bcftools/test.vcf.gz
|
|
md5sum: eb75ae1f08a1884f8edc59ed423471a2
|
|
- path: output/bcftools/test.vcf.gz.tbi
|
|
md5sum: 06d52177f819730dd409157914534e8d
|
|
- path: output/bcftools/test.fa
|
|
md5sum: c9e7ac4537756a0b33bcf17117f9a065
|