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906577873b
* New functions.nf * Convert code to create versions.yml * Update meta.yml * update output channel * Fix more meta.yml * Manually update remaining modules * remove superflous echo * Fix misformatted meta.yml files * Fix yaml, was list instead of dict * fix version for bcftools Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
32 lines
923 B
YAML
32 lines
923 B
YAML
name: fasttree
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description: Produces a Newick format phylogeny from a multiple sequence alignment. Capable of bacterial genome size alignments.
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keywords:
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- phylogeny
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- newick
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tools:
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- fasttree:
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description: FastTree infers approximately-maximum-likelihood phylogenetic trees from alignments of nucleotide or protein sequences
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homepage: http://www.microbesonline.org/fasttree/
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documentation: http://www.microbesonline.org/fasttree/#Usage
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tool_dev_url: None
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doi: ""
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licence: ['GPL v2']
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input:
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- alignment:
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type: file
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description: A FASTA format multiple sequence alignment file
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pattern: "*.{fasta,fas,fa,mfa}"
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output:
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- version:
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type: file
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description: File containing software version
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pattern: "versions.yml"
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- phylogeny:
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type: file
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description: A phylogeny in Newick format
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pattern: "*.{tre}"
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authors:
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- "@aunderwo"
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