mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-11 04:33:10 +00:00
906577873b
* New functions.nf * Convert code to create versions.yml * Update meta.yml * update output channel * Fix more meta.yml * Manually update remaining modules * remove superflous echo * Fix misformatted meta.yml files * Fix yaml, was list instead of dict * fix version for bcftools Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
36 lines
956 B
YAML
36 lines
956 B
YAML
name: glnexus
|
|
description: merge gVCF files and perform joint variant calling
|
|
keywords:
|
|
- merge
|
|
- gvcf
|
|
tools:
|
|
- glnexus:
|
|
description: scalable gVCF merging and joint variant calling for population sequencing projects.
|
|
homepage: https://github.com/dnanexus-rnd/GLnexus
|
|
documentation: https://github.com/dnanexus-rnd/GLnexus/wiki/Getting-Started
|
|
tool_dev_url: None
|
|
doi: https://doi.org/10.1101/343970
|
|
licence: ['Apache License 2.0']
|
|
|
|
input:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test' ]
|
|
- gvcfs:
|
|
type: list
|
|
description: Input genomic vcf files
|
|
pattern: "*.{gvcf,gvcf.gz,g.vcf,g.vcf.gz}"
|
|
|
|
output:
|
|
- version:
|
|
type: file
|
|
description: File containing software version
|
|
pattern: "versions.yml"
|
|
- bcf:
|
|
type: file
|
|
description: merged BCF file
|
|
pattern: "*.bcf"
|
|
authors:
|
|
- "@ramprasadn"
|