mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-10 20:23:10 +00:00
7bfbce94b0
* Added fq/lint module Additions: - fq/lint module, which checks paired end FASTQ files and confirms they are valid. Relates to #1967 * fq/lint linting * Correct Singularity image Co-authored-by: Maxime U. Garcia <maxime.garcia@scilifelab.se> Co-authored-by: Maxime U. Garcia <maxime.garcia@scilifelab.se>
32 lines
787 B
YAML
32 lines
787 B
YAML
name: "fq_lint"
|
|
description: write your description here
|
|
keywords:
|
|
- sort
|
|
tools:
|
|
- "fq":
|
|
description: "fq is a library to generate and validate FASTQ file pairs."
|
|
homepage: "https://github.com/stjude-rust-labs/fq"
|
|
documentation: "https://github.com/stjude-rust-labs/fq"
|
|
tool_dev_url: "https://github.com/stjude-rust-labs/fq"
|
|
doi: ""
|
|
licence: "['MIT']"
|
|
|
|
input:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- fastq:
|
|
type: file
|
|
description: FASTQ file list
|
|
pattern: "*.fastq{,.gz}"
|
|
|
|
output:
|
|
- versions:
|
|
type: file
|
|
description: File containing software versions
|
|
pattern: "versions.yml"
|
|
|
|
authors:
|
|
- "@adamrtalbot"
|