mirror of
https://github.com/MillironX/nf-core_modules.git
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e745e167c1
* fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
51 lines
1.8 KiB
YAML
51 lines
1.8 KiB
YAML
- name: ataqv ataqv test_ataqv_ataqv
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command: nextflow run ./tests/modules/ataqv/ataqv -entry test_ataqv_ataqv -c ./tests/config/nextflow.config -c ./tests/modules/ataqv/ataqv/nextflow.config
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tags:
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- ataqv
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- ataqv/ataqv
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files:
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- path: output/ataqv/test.ataqv.json
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contains:
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- '"forward_mate_reads": 101'
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- name: ataqv ataqv test_ataqv_ataqv_problem_reads
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command: nextflow run ./tests/modules/ataqv/ataqv -entry test_ataqv_ataqv_problem_reads -c ./tests/config/nextflow.config -c ./tests/modules/ataqv/ataqv/nextflow.config
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tags:
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- ataqv
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- ataqv/ataqv
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files:
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- path: output/ataqv/1.problems
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md5sum: d41d8cd98f00b204e9800998ecf8427e
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- path: output/ataqv/test.ataqv.json
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contains:
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- '"forward_mate_reads": 101'
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- name: ataqv ataqv test_ataqv_ataqv_peak
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command: nextflow run ./tests/modules/ataqv/ataqv -entry test_ataqv_ataqv_peak -c ./tests/config/nextflow.config -c ./tests/modules/ataqv/ataqv/nextflow.config
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tags:
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- ataqv
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- ataqv/ataqv
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files:
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- path: output/ataqv/test.ataqv.json
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contains:
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- '"forward_mate_reads": 101'
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- name: ataqv ataqv test_ataqv_ataqv_tss
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command: nextflow run ./tests/modules/ataqv/ataqv -entry test_ataqv_ataqv_tss -c ./tests/config/nextflow.config -c ./tests/modules/ataqv/ataqv/nextflow.config
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tags:
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- ataqv
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- ataqv/ataqv
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files:
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- path: output/ataqv/test.ataqv.json
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contains:
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- '"forward_mate_reads": 101'
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- name: ataqv ataqv test_ataqv_ataqv_excluded_regs
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command: nextflow run ./tests/modules/ataqv/ataqv -entry test_ataqv_ataqv_excluded_regs -c ./tests/config/nextflow.config -c ./tests/modules/ataqv/ataqv/nextflow.config
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tags:
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- ataqv
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- ataqv/ataqv
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files:
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- path: output/ataqv/test.ataqv.json
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contains:
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- '"forward_mate_reads": 101'
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