nf-core_modules/tests/modules/instrain/profile/test.yml
Matt Olm 031fbd37aa
Instrain profile (#1822)
* add instrain profile

* module instrain/profile

* add instrain profile

* module instrain/profile

* instrain profile

* Update modules/instrain/profile/main.nf

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update modules/instrain/profile/meta.yml

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update modules/instrain/profile/meta.yml

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update modules/instrain/profile/meta.yml

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update modules/instrain/profile/main.nf

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update modules/instrain/profile/main.nf

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update modules/instrain/profile/main.nf

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* update

* linting

* Apply suggestions from code review

* Update modules/instrain/profile/main.nf

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
2022-06-30 18:44:41 +02:00

9 lines
394 B
YAML

- name: "instrain"
command: nextflow run ./tests/modules/instrain/profile -entry test_instrain_profile -c ./tests/config/nextflow.config -c ./tests/modules/instrain/profile/nextflow.config
tags:
- instrain
- instrain/profile
files:
- path: output/instrain/versions.yml
- path: output/instrain/test.IS/output/test.IS_SNVs.tsv
md5sum: 1d753903af5a25be540dcff255e25a1f