nf-core_modules/tests/software/graphmap2/index/main.nf
Yuk Kei Wan a8720463ac
add graphmap index and align modules (from nanoseq modules) (#468)
* add graphmap index module

* add graphmap2/index

* add graohmap2 align module

* remove graphmap2 align md5sum
2021-04-30 13:18:58 +01:00

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#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { GRAPHMAP2_INDEX } from '../../../../software/graphmap2/index/main.nf' addParams( options: [:] )
workflow test_graphmap2_index {
fasta = file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true)
GRAPHMAP2_INDEX ( fasta )
}