nf-core_modules/tests/software/lofreq/call/test.yml at 95dfa7bc8d6ebef115ce6f4c1e9babc3635db623 - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-11-13 13:23:09 +00:00

Johnathan D 79f3a55f6e

Lofreq call (#564 )

* created templates

* updated functions.nf to the one on dev

* Created test main

* Fasta added and docker, conda, singularity passing

* Fixed output version lint

2021-07-06 10:41:00 +01:00

8 lines

277 B

YAML

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 - name: lofreq call test_lofreq_call
   command: nextflow run tests/software/lofreq/call -entry test_lofreq_call -c tests/config/nextflow.config
   tags:
     - lofreq
     - lofreq/call
   files:
     - path: output/lofreq/test.vcf.gz
       md5sum: 421b407a172191e54d054018c8868cf7