nf-core_modules/tests/software/pairtools/select/test.yml at 95dfa7bc8d6ebef115ce6f4c1e9babc3635db623 - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-11-11 04:33:10 +00:00

JIANHONG OU e0b7952b56

Pairtools select (#523 )

* add software/pairtools

* create a branch for pairtools/select

* fix the different output of conda and docker.

* rmove the md5sum for gzip files.

* Update software/pairtools/select/main.nf

Co-authored-by: Jose Espinosa-Carrasco <kadomu@gmail.com>

* update test file and documentation.

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
Co-authored-by: Jose Espinosa-Carrasco <kadomu@gmail.com>

2021-06-23 15:58:31 +02:00

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 - name: pairtools select test_pairtools_select
   command: nextflow run tests/software/pairtools/select -entry test_pairtools_select -c tests/config/nextflow.config
   tags:
     - pairtools/select
     - pairtools
   files:
     - path: output/pairtools/test.selected.pairs.gz
     - path: output/pairtools/test.unselected.pairs.gz