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fce4e60864
* bump bcftools filter * fix bcftools * rsem/preparereference * added calculateexpression * meta.yml and pytest_software * paired end * add test.yml
13 lines
446 B
Text
13 lines
446 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { RSEM_PREPAREREFERENCE } from '../../../../software/rsem/preparereference/main.nf' addParams(options: [:])
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workflow test_rsem_preparereference {
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fasta = file(params.test_data['homo_sapiens']['genome']['genome_fasta'], checkIfExists: true)
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gtf = file(params.test_data['homo_sapiens']['genome']['genome_gtf'], checkIfExists: true)
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RSEM_PREPAREREFERENCE ( fasta, gtf )
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}
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