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nf-core_modules/modules/samtools
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Lucpen 12afb6b0fa
Update samtools view to add input path(index) (#1539) 
* feat added index as input, to allow module to be used for subsampling

* fix test

* feat added index to meta.yml

* Update modules/samtools/view/meta.yml

feat corrected description of idea pattern file in meta.yml

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
2022-04-22 10:01:47 +02:00
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ampliconclip Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
bam2fq Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
collatefastq Add samtools/collatefastq module (#1536) 2022-04-20 10:05:17 +02:00
depth Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
faidx Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
fastq Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
fixmate Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
flagstat Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
idxstats Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
index Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
merge Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
mpileup Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
sort Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
stats Samtools version update (#1507) 2022-04-11 14:26:28 +02:00
view Update samtools view to add input path(index) (#1539) 2022-04-22 10:01:47 +02:00