nf-core_modules/tests/modules/freebayes/test.yml
Maxime U. Garcia 9767b081b9
Merge freebayes subtools (#1015)
* feat: merge freebayes subtools

* fix: typo

* assess comments from review

* fix: path to module
2021-11-03 11:22:06 +01:00

39 lines
1.3 KiB
YAML

- name: freebayes test_freebayes
command: nextflow run tests/modules/freebayes -entry test_freebayes -c tests/config/nextflow.config
tags:
- freebayes
files:
- path: output/freebayes/test.vcf.gz
md5sum: 04d60a7135768777e0c764daec6519db
- name: freebayes test_freebayes_bed
command: nextflow run tests/modules/freebayes -entry test_freebayes_bed -c tests/config/nextflow.config
tags:
- freebayes
files:
- path: output/freebayes/test.vcf.gz
md5sum: fc6e228c8ac5508bd83da45eafc2e7b2
- name: freebayes test_freebayes_cram
command: nextflow run tests/modules/freebayes -entry test_freebayes_cram -c tests/config/nextflow.config
tags:
- freebayes
files:
- path: output/freebayes/test.vcf.gz
md5sum: 91b8caaa0e396e1ba4f264a83bb67254
- name: freebayes test_freebayes_somatic
command: nextflow run tests/modules/freebayes -entry test_freebayes_somatic -c tests/config/nextflow.config
tags:
- freebayes
files:
- path: output/freebayes/test.vcf.gz
md5sum: 40da977199f16d9888e0e0e07e8bebee
- name: freebayes test_freebayes_somatic_cram_intervals
command: nextflow run tests/modules/freebayes -entry test_freebayes_somatic_cram_intervals -c tests/config/nextflow.config
tags:
- freebayes
files:
- path: output/freebayes/test.vcf.gz
md5sum: dd976880365287d9ad31a606eb4d091f