mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-13 05:13:09 +00:00
977d96ed0b
* add racon * add racon * add racon * add racon module * add racon module * edit racon module * edit racon module * edit racon module * edit racon module Co-authored-by: Daniel Straub <42973691+d4straub@users.noreply.github.com> Co-authored-by: Chris Cheshire <chris.j.cheshire@gmail.com>
15 lines
No EOL
577 B
Text
15 lines
No EOL
577 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { RACON } from '../../../modules/racon/main.nf' addParams( options: [:] )
|
|
|
|
workflow test_racon {
|
|
input = [ [ id:'test', single_end:true ], // meta map
|
|
file(params.test_data['bacteroides_fragilis']['nanopore']['test_fastq_gz'], checkIfExists: true),
|
|
file(params.test_data['bacteroides_fragilis']['genome']['genome_fna_gz'], checkIfExists: true),
|
|
file(params.test_data['bacteroides_fragilis']['genome']['genome_paf'], checkIfExists: true)
|
|
]
|
|
|
|
RACON ( input )
|
|
} |