nf-core_modules/tests/software/bedtools/bamtobed/test.yml at 9842a1083366a85a312458454d9b35bb1b5772cd - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-12-23 03:28:17 +00:00

Harshil Patel 466ab67808

Fixes for nanoseq modules (#479 )

* Fix minimap2 index module

* Fix minimap2 index tests

* Fix graphmap2 index module

* Fix graphmap2 module

* Fix ECLint

* Fix bedtools bamtobed module

* Fix tests for bedtools bamtobed module

* Add tag for graphmap2 align module

* Fix EClint

* Fix qcat module

* Add md5sum for graphmap2/align module

* Remove non-started test data file

* Remove md5sum for graphmap2 align

2021-04-30 15:57:43 +01:00

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 - name: bedtools bamtobed
   command: nextflow run ./tests/software/bedtools/bamtobed -entry test_bedtools_bamtobed -c tests/config/nextflow.config
   tags:
     - bedtools
     - bedtools/bamtobed
   files:
     - path: ./output/bedtools/test.bed
       md5sum: 3c6b88e414debd889c10eb972180b687