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b02e648c22
* Add motus/merge module, missing test yml * Fix prefix * Fix polymersase * Update test meta.yml * Try new version system * Typo fix * Clairfy docs for the version file * Switch to directory auto detection * Now with the change and not just meta * Remove now unneeded input parameter from test * Fix input type check * Try adding db requirement to fix docker issue * Update modules/motus/merge/main.nf * Fix input * Apply suggestions from code review * Fix md5sums * Replace debugging db location with actual * Fix contains due to further varialbility * Indenting
12 lines
473 B
YAML
12 lines
473 B
YAML
- name: motus merge test_motus_merge
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command: nextflow run ./tests/modules/motus/merge -entry test_motus_merge -c ./tests/config/nextflow.config -c ./tests/modules/motus/merge/nextflow.config
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tags:
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- motus
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- motus/merge
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files:
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- path: output/motus/motus_merged.txt
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contains: ["#consensus_taxonomy"]
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- path: output/motus/test.out
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contains: ["#consensus_taxonomy"]
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- path: output/motus/test2.out
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contains: ["#consensus_taxonomy"]
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