nf-core_modules/tests/modules/rgi/main/test.yml
James A. Fellows Yates 486eebfd29
Update RGI: add database version reporting to module (#1824)
* Add rgi database version to module as fixed within the container/environment

* Remove check of the version file

* Or rather check for existance of the versions file not contents

* Delete main.nf

Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com>
2022-06-29 16:30:51 -06:00

10 lines
416 B
YAML

- name: rgi main
command: nextflow run ./tests/modules/rgi/main -entry test_rgi_main -c ./tests/config/nextflow.config -c ./tests/modules/rgi/main/nextflow.config
tags:
- rgi
- rgi/main
files:
- path: output/rgi/test.json
contains: ["NZ_LS483480", "orf_end", "perc_identity", "Pulvomycin"]
- path: output/rgi/test.txt
contains: ["NZ_LS483480", "ORF_ID", "Model_type", "Pulvomycin"]