nf-core_modules/tests/modules/deepvariant/test.yml
FriederikeHanssen 1287ba48fe
Update version & add intervals usage (#1214)
* Update version & add intervals usage

* Fix config when passing intervals as file

* Use proper paths
2022-01-17 16:40:31 +01:00

23 lines
949 B
YAML

- name: deepvariant test_deepvariant
command: nextflow run tests/modules/deepvariant -entry test_deepvariant -c tests/config/nextflow.config
tags:
- deepvariant
files:
- path: output/deepvariant/test_out.g.vcf.gz
md5sum: c4c65a3eaf62d6fbe0aba0a414318c8d
- path: output/deepvariant/test_out.vcf.gz
md5sum: ad964f68ac1d1b2720a9a4e0b6a3a389
- path: output/deepvariant/versions.yml
md5sum: 51572055ca5c07fc4001b25a9c273bf8
- name: deepvariant test_deepvariant_cram_intervals
command: nextflow run tests/modules/deepvariant -entry test_deepvariant_cram_intervals -c tests/config/nextflow.config
tags:
- deepvariant
files:
- path: output/deepvariant/test_out.g.vcf.gz
md5sum: c4c65a3eaf62d6fbe0aba0a414318c8d
- path: output/deepvariant/test_out.vcf.gz
md5sum: ad964f68ac1d1b2720a9a4e0b6a3a389
- path: output/deepvariant/versions.yml
md5sum: 7d9293db0d44423b114abc7116feb967