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1f3f2b18bb
* Add new module macrel/contigs * removed trailing whitespace * removed whitespace * linting cleanup * Apply suggestions from code review Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Updated the test.yml It didnt upload the updated version earlier for some reason :( * Update test.yml * Update test.yml * Update test.yml as generated by pytest * Update test.yml * updated the version issue * Update tests/modules/macrel/contigs/test.yml * Update modules/macrel/contigs/main.nf * Update modules/macrel/contigs/main.nf * Update pytest_modules.yml * Update pytest_modules.yml * Update modules/macrel/contigs/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Zipped all fasta outputs * Update main.nf * Update test.yml * Update test.yml * Update main.nf * Update main.nf (gzip -n) * Update test.yml * Update main.nf * Update main.nf * Update test.yml * Update tests/modules/macrel/contigs/test.yml * Update modules/macrel/contigs/main.nf * Apply suggestions from code review Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: darcy220606 <ananhamido@hotmail.com> Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
16 lines
724 B
YAML
16 lines
724 B
YAML
- name: macrel contigs test_macrel_contigs
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command: nextflow run ./tests/modules/macrel/contigs -entry test_macrel_contigs -c ./tests/config/nextflow.config -c ./tests/modules/macrel/contigs/nextflow.config
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tags:
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- macrel/contigs
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- macrel
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files:
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- path: output/macrel/test/README.md
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md5sum: fa3706dfc95d0538a52c4d0d824be5fb
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- path: output/macrel/test/test.all_orfs.faa.gz
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- path: output/macrel/test/test.prediction.gz
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- path: output/macrel/test/test.smorfs.faa.gz
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md5sum: 79704c6120c2f794518301af6f9b963d
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- path: output/macrel/test/test_log.txt
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md5sum: 6fdba143dce759597eb9f80e5d968729
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- path: output/macrel/versions.yml
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md5sum: be8bf0d0647751c635c3736655f29f85
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