mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 13:43:09 +00:00
21 lines
840 B
YAML
21 lines
840 B
YAML
- name: trimgalore single-end
|
|
command: nextflow run ./tests/software/trimgalore/ -entry test_trimgalore_single_end -c tests/config/nextflow.config
|
|
tags:
|
|
- trimgalore
|
|
files:
|
|
# These can't be md5'd reliably
|
|
# TODO Test for includes
|
|
- path: output/trimgalore/test.fastq.gz_trimming_report.txt
|
|
- path: output/trimgalore/test_trimmed.fq.gz
|
|
|
|
- name: trimgalore paired-end
|
|
command: nextflow run ./tests/software/trimgalore/ -entry test_trimgalore_paired_end -c tests/config/nextflow.config
|
|
tags:
|
|
- trimgalore
|
|
files:
|
|
# These can't be md5'd reliably
|
|
# TODO Test for includes
|
|
- path: output/trimgalore/test_1.fastq.gz_trimming_report.txt
|
|
- path: output/trimgalore/test_1_val_1.fq.gz
|
|
- path: output/trimgalore/test_2.fastq.gz_trimming_report.txt
|
|
- path: output/trimgalore/test_2_val_2.fq.gz
|