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a3684d9594
* ci: Add modules lint step Moved it ahead of the nextflow install so ideally it'll fail before we bother doing any more setup * ci: _ => / * Update tests/config/pytest_software.yml Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
21 lines
750 B
YAML
21 lines
750 B
YAML
- name: cat fastq single-end
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command: nextflow run ./tests/software/cat/fastq -entry test_cat_fastq_single_end -c tests/config/nextflow.config
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tags:
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- cat
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- cat/fastq
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- cat_fastqc_single_end
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files:
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- path: ./output/merged_fastq/test.merged.fastq.gz
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md5sum: 59f6dbe193741bb40f498f254aeb2e99
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- name: cat fastq fastqc_paired_end
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command: nextflow run ./tests/software/cat/fastq -entry test_cat_fastq_paired_end -c tests/config/nextflow.config
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tags:
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- cat
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- cat/fastq
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- cat_fastqc_paired_end
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files:
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- path: ./output/merged_fastq/test_2.merged.fastq.gz
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md5sum: d2b1a836eef1058738ecab36c907c5ba
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- path: ./output/merged_fastq/test_1.merged.fastq.gz
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md5sum: 59f6dbe193741bb40f498f254aeb2e99
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