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https://github.com/MillironX/nf-core_modules.git
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a3684d9594
* ci: Add modules lint step Moved it ahead of the nextflow install so ideally it'll fail before we bother doing any more setup * ci: _ => / * Update tests/config/pytest_software.yml Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
18 lines
651 B
YAML
18 lines
651 B
YAML
- name: gatk4 mergevcfs test_gatk4_mergevcfs
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command: nextflow run tests/software/gatk4/mergevcfs -entry test_gatk4_mergevcfs -c tests/config/nextflow.config
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tags:
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- gatk4/mergevcfs
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- gatk4
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files:
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- path: output/gatk4/test.merged.vcf.gz
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md5sum: ff48f175e26db2d4b2957762f6d1c715
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- name: gatk4 mergevcfs test_gatk4_mergevcfs_refdict
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command: nextflow run tests/software/gatk4/mergevcfs -entry test_gatk4_mergevcfs_refdict -c tests/config/nextflow.config
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tags:
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- gatk4/mergevcfs
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- gatk4
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- gatk4/mergevcfs_refdict
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files:
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- path: output/gatk4/test.merged.vcf.gz
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md5sum: ff48f175e26db2d4b2957762f6d1c715
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