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a3684d9594
* ci: Add modules lint step Moved it ahead of the nextflow install so ideally it'll fail before we bother doing any more setup * ci: _ => / * Update tests/config/pytest_software.yml Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
27 lines
851 B
YAML
27 lines
851 B
YAML
- name: tiddit sv
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command: nextflow run ./tests/software/tiddit/sv -entry test_tiddit_sv -c tests/config/nextflow.config
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tags:
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- tiddit
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- tiddit/sv
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- vcf
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files:
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- path: output/tiddit/test.ploidy.tab
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md5sum: 45e050b0e204f0a5a3a99627cc440eaa
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- path: output/tiddit/test.signals.tab
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md5sum: 25408a43dbdd01c08e33a6d670f2bb84
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- path: output/tiddit/test.vcf
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should_exist: true
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- name: tiddit sv no ref
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command: nextflow run ./tests/software/tiddit/sv -entry test_tiddit_sv_no_ref -c tests/config/nextflow.config
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tags:
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- tiddit
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- tiddit/sv
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- vcf
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files:
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- path: output/tiddit/test.ploidy.tab
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md5sum: 45e050b0e204f0a5a3a99627cc440eaa
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- path: output/tiddit/test.signals.tab
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md5sum: 25408a43dbdd01c08e33a6d670f2bb84
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- path: output/tiddit/test.vcf
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should_exist: true
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