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18 lines
377 B
Text
Executable file
18 lines
377 B
Text
Executable file
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { PICARD_MARKDUPLICATES } from '../main.nf' addParams( options: [:] )
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workflow test {
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def input = []
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input = [ [ id:'test', single_end:false ], // meta map
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file("${baseDir}/input/test.paired_end.sorted.bam", checkIfExists: true) ]
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PICARD_MARKDUPLICATES ( input )
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}
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workflow {
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test()
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}
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